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=== Old Link of CAGMon Project@KGWG Wiki === * [[https://kgwg.nims.re.kr/cbcwiki/CAGMon]] 
CAGMon  A Detchar Tool for Noise Propagation using Correlation Analysis
Contents
Project Goal
The goal of this project is to find a systematic way of identifying the abnormal glitches in the gravitationalwave data using various methods of correlation analysis. Usually the community such as LIGO and Virgo uses a conventional way of finding glitches in auxiliary channels of the detector  KleinWelle, Omicron, Ordered Veto Lists, etc. However, some different ways can be possible to find and monitor them in a (quasi) realtime. Also the method can point out which channel is responsible for the found glitch. In this project, we study its possibility to apply three different correlation methods  maximal information coefficient, Pearson's correlation coefficient, and Kendall's tau coefficient  in the gravitational wave data from LIGO detector.
Participants
 John J. Oh (lead, NIMS)
 YoungMin Kim (UNIST)
 More....
Preliminaries
Old Link of CAGMon Project@KGWG Wiki
Methods
Pearson's Correlation Coefficient
 PCC is a measure of a linear correlation between two random variables.
 Pearson's r is defined as:
 \[ r=\frac{\sum_{i=1}^{n} (x_i  \bar{x})(y_i\bar{y})}{\sqrt{\sum_{i=1}^{n} (x_i\bar{x})^2} \sqrt{\sum_{i=1}^{n} (y_i \bar{y})^2}} \]
Kendall's tau Coefficient
 \[ \tau = \frac{2(CD)}{n(n1)} \]
where C and D are number of concordant and disconcordant pairs, respectively.
Maximal Information Coefficient
Basically, maximal information coefficient is defined using the mutual information score following the Ref. [1]. Formally, the mutual information of two discrete random variables X and Y can be defined as: \begin{align} I(X;Y) = \sum_{y\in Y} \sum_{x\in X} p(x, y) \log \left(\frac{p(x, y)}{p(x)p(y)}\right) \end{align}
where p(x,y) is the joint probability distribution function of X and Y, and p(x) and p(y) are the marginal probability distribution functions of X and Y respectively. Intuitively, mutual information measures the information that X and Y share: it measures how much knowing one of these variables reduces uncertainty about the other. For example, if X and Y are independent, then knowing X does not give any information about Y and vice versa, so their mutual information is zero [Wikipedia].
It measures nonlinear correlation between two data samples while the PCC (Pearson correlation coefficient) and the Spearman coefficient are only for the linear relationship.
With this definition of mutual information, MIC is defined by [2] \[ MIC(D) = \max_{xy
Preliminary Knowledges
Previous Study Results
References
CAGMonLKR3 Guide : to be updated
GitLab: to be pushed
D. N. Reshef, Y. A. Reshef, H. K. Finucane, S. R. Grossman, G. McVean, P. J. Turnbaugh, E. S. Lander, M. Mitzenmacher, P. C. Sabeti, Science, 334, 1518 (2011).
System Requirements for KAGMon
 python 3
 numpy
 scipy
 matplotlib
 minepy
 gwpy
Data & Code Preparation
KAGRA ER2 Data
 location: ldgui @ sdfarm  /data/kagra/archive/data/full/
1247024298 / 5 hours (2019. Jul. 13 12:38:00 17:57:50) http://gwwiki.icrr.utokyo.ac.jp/JGWwiki/KAGRA/Subgroups/DET/RUN/ER190713
Summary page: Run Status  https://www.icrr.utokyo.ac.jp/~yuzu/bKAGRA_summary/html/20190713_GlitchPlot.html
 TStride = 30, FStride = 8 / dur = 240 / 80 Jobs
 Main Channel: K1:CALCS_PROC_MICH_DISPLACEMENT_DQ
 Aux Channels: 464 DQ Channels (+ unsafe)
LIGO Data
O3 glitches and their witness channels : https://wiki.ligo.org/DetChar/GlitchesandWitnesses
 list of glitches
 Magnetometer set
 gpstimes: /home/cavaglia/karoo_omicron_O2endxmag/data/gpstimes_endxmag_triggers_sorted_analyzed_ready_12049.txt @LLO (ldaspcdev1.ligola.caltech.edu)
 Air Compressor set
 gpstimes: /home/cavaglia/karoo_omicron_O1aircompressor/data/gpstimes_O1aircompressor_sorted.txt @ LHO(ldaspcdev1.ligowa.caltech.edu)
 Magnetometer set
Scheme & Goal
Preliminary Run Tests:
Summary of 19200s Run: KAGRACAGMonTest.pdf
Observing Run Test of KAGRA O1
Triggerbased Analysis
 Data: April 19 2020
 Observing Information:
Inspiral Range Plot 
Detector Sensitivity 
Omicron Glitch Gram 



 Loudest events by SNR:
 10 loudest K1:CALCS_PROC_C00_STRAIN_DBL_DQ (Omicron) events by SNR with minimum 8s separation. Launch omega scans
GPS time 
UTC time 
Duration 
Peak frequency 
Central freq. 
Bandwidth 
SNR 
1271311593.609 
April 19 2020 06:06:15.609 
0.031 
121.192 
121.195 
1.723 
288.743 
1271302217.998 
April 19 2020 03:29:59.998 
0.004 
111.850 
112.298 
20.032 
221.521 
1271356741.438 
April 19 2020 18:38:43.437 
0.125 
41.141 
41.142 
0.585 
202.916 
1271337318.002 
April 19 2020 13:15:00.0 
0.004 
111.850 
112.298 
20.032 
170.477 
1271340918.001 
April 19 2020 14:15:00.000 
0.002 
133.756 
134.291 
23.955 
166.644 
1271325225.998 
April 19 2020 09:53:27.998 
0.004 
111.850 
112.298 
20.032 
164.685 
1271313018.002 
April 19 2020 06:30:00.001 
0.004 
111.850 
112.298 
20.032 
162.386 
1271303583.984 
April 19 2020 03:52:45.984 
0.031 
121.192 
121.195 
1.723 
161.520 
1271296947.422 
April 19 2020 02:02:09.421 
0.031 
121.192 
121.195 
1.723 
161.284 
1271336417.998 
April 19 2020 12:59:59.998 
0.004 
111.850 
112.298 
20.032 
160.725 
Working Paper
 JKPS Special Issue: